Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008894.1 Hibiscus syriacus cultivar Beakdansim tig00112162_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40496

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3147--3213
25
2.6
25
81
6
82
82
0
14
2
0.79
3146--3209
28
2.3
26
82
15
76
81
0
15
3
0.82
3146--3214
13
4.9
14
76
16
72
79
0
17
2
0.85
4334--4818
84
5.8
84
96
2
856
27
13
21
37
1.91
5559--6225
113
5.9
113
96
0
1185
37
12
20
29
1.89
6538--6650
3
37.7
3
92
0
190
35
1
0
62
1.05
7084--7175
37
2.5
36
78
15
89
68
6
20
4
1.30
7959--8006
19
2.7
17
87
12
78
18
4
2
75
1.07
8044--8078
12
2.8
13
91
8
56
42
0
0
57
0.99
8814--8964
20
7.4
20
80
6
99
23
18
25
33
1.97
8823--8899
40
1.9
40
94
0
136
27
19
29
23
1.98
8813--8962
41
3.7
41
80
2
135
24
18
25
32
1.97
8930--8981
20
2.5
21
87
3
70
21
23
17
38
1.93
10549--10675
60
2.1
60
83
2
157
40
11
41
6
1.67
11154--11210
27
2.1
27
86
0
78
24
8
12
54
1.65
20690--20784
18
5.2
18
84
1
118
21
13
32
32
1.92
26160--26231
18
3.9
18
73
10
74
29
29
19
22
1.98
30409--30498
18
5.1
18
94
2
155
22
16
32
28
1.96
34193--34238
20
2.3
20
96
0
83
23
30
23
21
1.99
36964--36989
5
5.2
5
100
0
52
0
19
57
23
1.40

Tables:   1

The End!