Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008951.1 Hibiscus syriacus cultivar Beakdansim tig00112277_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  153195

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142453--142683
60
3.8
60
85
3
300
19
25
18
36
1.94
142718--142771
20
2.7
20
91
0
81
12
18
16
51
1.75
142760--142808
19
2.5
20
90
3
73
16
16
22
44
1.86
142905--142944
20
2.0
20
90
9
64
57
5
0
37
1.21
148574--148625
23
2.3
23
89
0
77
38
9
21
30
1.85
148538--148699
87
1.9
87
97
0
306
40
10
15
33
1.81
148694--149181
197
2.5
196
82
6
583
31
15
12
40
1.85
149267--149313
16
3.0
16
75
12
53
51
0
0
48
1.00
149264--149356
30
3.1
30
79
13
86
47
1
1
50
1.15
149281--149367
14
6.2
14
69
9
52
47
1
1
50
1.16
149295--149363
28
2.5
28
74
6
70
49
1
1
47
1.19
149647--149718
32
2.3
32
85
4
103
44
20
9
25
1.82
149647--149734
30
2.9
30
83
5
88
38
21
10
29
1.86
150307--150352
19
2.4
19
100
0
92
41
17
8
32
1.80
150463--150496
17
2.0
17
100
0
68
41
29
5
23
1.78

Tables:   1   2

The End!