Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008980.1 Hibiscus syriacus cultivar Beakdansim tig00112342_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  184855

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
145193--145313
60
2.0
58
82
9
145
40
7
0
52
1.30
145305--145402
26
3.6
27
84
4
117
51
1
3
44
1.24
145397--145462
11
6.3
10
71
13
53
63
0
3
33
1.10
145309--145469
29
5.7
30
70
19
87
54
0
3
41
1.20
145361--145462
51
2.0
53
86
7
147
60
0
3
35
1.15
148154--148333
97
1.9
97
93
0
315
40
21
12
25
1.89
153615--153983
131
2.8
131
87
1
499
38
16
12
32
1.86
164971--165045
3
25.0
3
100
0
150
66
0
0
33
0.92
166562--166589
2
14.0
2
100
0
56
50
0
0
50
1.00
168686--168723
16
2.4
16
90
0
58
42
5
23
28
1.76
171657--171734
28
2.7
28
80
6
66
23
1
3
71
1.09
173190--173221
16
1.9
17
93
6
57
15
12
0
71
1.14
174158--174197
20
2.0
20
85
0
53
27
7
0
65
1.20
174195--174246
13
4.2
12
83
16
54
25
1
0
73
0.94
175847--175900
14
3.8
14
81
11
56
25
14
9
50
1.73
175862--175900
15
2.7
15
88
4
53
20
15
12
51
1.76
179055--179099
23
2.0
23
95
0
81
66
13
15
4
1.39
181302--181809
83
6.1
83
93
3
837
27
14
21
36
1.93
184247--184323
22
3.5
22
83
0
91
35
11
9
44
1.73

Tables:   1   2

The End!