Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009029.1 Hibiscus syriacus cultivar Beakdansim tig00112429_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  496945

Tables:   1   2   3   

This is table  3  of  3  ( 252 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
479933--479960
2
14.0
2
100
0
56
50
0
0
50
1.00
479935--480024
37
2.3
39
81
5
121
47
1
4
46
1.29
479947--480143
65
3.0
65
84
8
249
44
3
6
46
1.45
480012--480193
37
5.1
36
81
14
209
43
4
6
45
1.48
480056--480119
29
2.2
29
97
0
119
45
4
6
43
1.50
480084--480193
38
2.9
37
85
5
150
44
4
6
44
1.49
480084--480284
38
5.6
36
75
16
147
43
3
6
46
1.46
480157--480225
30
2.4
28
83
9
84
46
2
4
46
1.37
479944--480264
102
3.1
101
77
12
291
45
3
5
45
1.42
480000--480297
102
2.9
98
75
16
264
43
3
6
46
1.46
483011--483104
36
2.7
36
91
4
149
60
0
0
39
0.97
484522--484599
17
4.6
17
90
0
120
23
0
46
30
1.53

Tables:   1   2   3

The End!