Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009055.1 Hibiscus syriacus cultivar Beakdansim tig00112470_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  451578

Tables:   1   2   3   

This is table  3  of  3  ( 259 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
412231--412268
14
2.7
14
84
11
51
21
10
28
39
1.86
417204--417265
16
3.9
16
89
0
88
14
27
20
37
1.92
418271--418327
25
2.3
25
84
6
71
50
1
1
45
1.22
425016--425063
20
2.4
20
86
6
62
60
6
8
25
1.49
425223--425265
2
22.0
2
90
4
70
51
2
0
46
1.13
425223--425272
14
3.7
14
89
5
68
52
4
0
44
1.20
425729--425769
20
2.1
19
86
4
55
7
39
36
17
1.77
426966--427741
105
7.4
105
94
0
1302
22
18
24
33
1.97
428553--428584
11
2.9
11
95
0
55
0
12
0
87
0.54
428553--428583
16
2.0
15
93
6
53
0
9
0
90
0.46
439418--439458
2
21.0
2
90
5
66
51
2
0
46
1.14
439418--439466
12
3.8
13
84
10
57
53
4
0
42
1.20
439920--439960
20
2.1
19
86
4
55
7
39
36
17
1.77
441086--441123
2
19.0
2
100
0
76
0
50
0
50
1.00
441464--441503
21
1.9
21
85
10
55
52
0
0
47
1.00
442179--442211
2
16.5
2
100
0
66
48
0
0
51
1.00
449931--449984
19
2.9
18
76
17
65
37
1
0
61
1.07
450352--450390
16
2.4
16
86
0
51
10
5
28
56
1.54
451089--451115
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1   2   3

The End!