Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009057.1 Hibiscus syriacus cultivar Beakdansim tig00112472_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47786

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1321--1368
15
3.1
15
75
19
53
35
6
0
58
1.23
1321--1383
30
2.1
29
82
14
74
33
4
0
61
1.17
4298--4333
18
1.9
19
88
5
56
47
0
0
52
1.00
10303--10341
19
2.1
19
85
9
53
41
0
5
53
1.23
14374--14403
15
2.0
15
100
0
60
40
13
20
26
1.89
26762--26789
2
14.0
2
100
0
56
50
0
0
50
1.00
27628--27670
18
2.2
20
84
8
54
37
20
0
41
1.53
29682--29730
25
2.0
25
87
0
71
40
2
16
40
1.60
29819--29872
27
2.0
26
85
7
72
50
1
1
46
1.23
32905--32950
17
2.6
17
83
10
58
39
4
0
56
1.19
32921--32964
22
2.0
23
86
4
63
38
4
0
56
1.20
43691--43740
25
2.1
24
85
10
68
36
26
10
28
1.88
45887--45931
22
2.0
22
82
0
54
42
6
11
40
1.67
45958--47786
180
10.2
182
90
3
2804
41
12
17
28
1.86
45958--47786
361
5.1
363
89
4
2818
41
12
17
28
1.86

Tables:   1

The End!