Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009061.1 Hibiscus syriacus cultivar Beakdansim tig00112482_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76623

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1759--1804
22
2.1
22
84
8
58
36
2
8
52
1.45
5274--5325
20
2.6
20
90
0
86
36
17
23
23
1.95
20407--20546
30
4.7
30
87
0
190
34
14
12
38
1.84
21412--21446
3
11.7
3
100
0
70
65
0
34
0
0.93
23423--23490
24
2.9
24
82
6
77
47
16
13
23
1.81
23441--23490
23
2.1
24
88
3
75
44
18
16
22
1.87
24377--24452
25
3.0
25
66
22
68
43
3
9
43
1.55
24373--24485
51
2.2
50
90
1
181
41
4
10
43
1.59
30844--31108
100
2.7
99
85
3
338
33
16
16
33
1.91
31425--31450
11
2.4
11
100
0
52
46
38
7
7
1.61
32533--32946
124
3.3
123
82
3
465
32
22
17
28
1.96
32934--33367
84
5.2
84
85
4
522
30
25
20
23
1.98
33716--33977
37
7.1
36
77
10
183
43
3
7
46
1.48
33757--34102
38
9.6
37
76
13
262
43
2
7
47
1.42
33876--34102
37
6.5
32
70
21
138
44
2
6
47
1.41
33764--34102
74
4.8
69
76
14
266
42
2
7
47
1.43
34085--34137
20
2.5
20
82
17
56
33
0
3
62
1.13
34106--34154
22
2.2
22
82
7
55
22
2
4
71
1.13
34735--34771
19
1.9
19
88
0
56
48
16
32
2
1.60
35419--35552
5
26.8
5
69
17
57
19
5
0
74
1.05
35420--35555
9
14.9
9
69
20
61
19
5
0
75
1.04
35410--35489
15
5.5
15
74
15
51
11
7
2
78
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35498--35545
14
3.6
14
78
10
57
29
2
0
68
1.01
36142--36188
19
2.6
17
78
18
51
31
17
25
25
1.97
36182--36217
16
2.2
16
95
0
63
27
16
25
30
1.97
36248--36310
22
2.9
22
97
0
117
30
14
28
26
1.95
36654--37052
59
6.8
58
91
1
582
35
11
19
34
1.87
43129--43180
22
2.5
22
90
6
81
28
15
28
26
1.96
42956--43182
95
2.4
95
83
2
287
30
14
25
29
1.95
43514--44024
59
8.8
59
87
5
697
34
12
19
34
1.89
43890--44018
60
2.2
59
91
4
206
35
10
16
37
1.84
50840--50899
29
2.1
29
100
0
120
50
13
13
23
1.77
55526--55584
29
2.0
29
100
0
118
49
13
13
23
1.78
62805--62925
60
2.0
60
91
0
197
16
29
11
42
1.83
66095--66173
15
5.1
15
76
8
77
7
13
53
25
1.66
66098--66191
21
4.2
21
78
15
107
6
12
55
25
1.61
66095--66190
48
2.0
48
95
0
174
7
13
54
25
1.65

Tables:   1

The End!