Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000908.1 Hibiscus syriacus cultivar Beakdansim tig00001802_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  480356

Tables:   1   2   3   

This is table  3  of  3  ( 249 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
445126--445198
3
24.3
3
97
0
137
32
0
1
65
1.01
445598--445646
25
2.0
25
87
0
71
61
12
26
0
1.31
445644--445673
15
1.9
16
93
6
53
73
3
23
0
0.98
445644--445674
16
1.9
16
93
0
53
74
3
22
0
0.96
446565--446605
20
2.0
21
85
4
57
36
2
2
58
1.24
462854--462881
2
14.0
2
100
0
56
50
50
0
0
1.00
463931--464019
26
3.4
27
78
6
94
19
3
29
48
1.65
465495--465532
2
19.0
2
100
0
76
50
0
0
50
1.00
478290--478329
21
1.9
21
94
0
71
30
2
7
60
1.38

Tables:   1   2   3

The End!