Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009095.1 Hibiscus syriacus cultivar Beakdansim tig00112542_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71342

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12595--12668
37
2.1
34
87
7
103
37
16
5
40
1.71
18015--18078
32
2.0
32
90
0
101
32
6
17
43
1.74
23389--23436
19
2.5
20
82
3
62
29
12
6
52
1.63
24296--24365
34
2.1
32
86
5
95
21
31
14
32
1.93
30126--30164
21
1.9
20
84
5
51
30
7
7
53
1.57
30544--30581
2
19.0
2
100
0
76
50
0
0
50
1.00
34468--34514
13
3.5
13
77
13
51
55
0
2
42
1.12
35974--36065
3
30.7
3
95
0
166
64
0
2
33
1.06
36387--36939
113
4.9
113
94
0
930
29
19
13
37
1.90
37642--38314
84
8.0
84
97
0
1220
34
21
13
29
1.92
39449--39499
14
3.8
13
85
10
66
0
15
0
84
0.63
39449--39499
25
2.0
25
92
7
84
0
15
0
84
0.63
39449--39502
10
5.3
10
80
12
65
0
16
0
83
0.65
50027--50063
15
2.7
15
88
12
53
62
8
5
24
1.44
50054--50104
18
2.9
17
75
16
50
72
1
0
25
0.95
52256--52380
3
41.7
3
98
0
241
65
0
0
33
0.98
52662--52756
30
3.2
30
98
0
181
20
40
9
30
1.84
56729--56818
44
2.0
44
87
4
128
24
16
26
32
1.96
56734--56810
21
3.6
21
68
6
64
22
15
29
32
1.95
57031--57074
18
2.4
18
80
0
52
47
2
18
31
1.61
60327--60391
23
2.8
23
76
0
67
20
21
23
35
1.96
67723--67781
23
2.6
23
80
0
82
27
25
27
20
1.99

Tables:   1

The End!