Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009099.1 Hibiscus syriacus cultivar Beakdansim tig00112553_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  322120

Tables:   1   2   

This is table  2  of  2  ( 129 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
299244--299283
21
1.9
21
85
10
55
35
10
2
52
1.48
301210--301390
64
2.8
63
83
3
218
27
17
26
29
1.97
301338--301388
19
2.7
19
85
8
70
25
15
35
23
1.94
301231--301390
65
2.5
65
86
3
216
27
16
26
30
1.97
301232--301435
65
3.2
64
78
15
179
27
16
25
30
1.97
301607--301646
20
2.0
21
85
14
57
45
7
5
42
1.54
302782--302824
20
2.1
21
87
8
63
13
16
0
69
1.19
306002--306051
24
2.1
24
85
7
66
24
2
14
60
1.45
310895--312185
428
3.0
429
93
1
2185
27
14
23
35
1.93

Tables:   1   2

The End!