Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009134.1 Hibiscus syriacus cultivar Beakdansim tig00112634_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  270421

Tables:   1   2   

This is table  2  of  2  ( 130 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
236222--236281
31
1.9
32
86
3
86
38
3
5
53
1.39
238736--238801
31
2.2
31
83
2
80
34
16
3
45
1.63
246953--247235
95
3.0
94
79
6
322
53
14
7
24
1.66
246951--247232
91
3.0
93
79
5
300
53
14
7
24
1.66
247243--247305
27
2.3
27
86
0
90
49
17
12
20
1.79
253917--253956
20
2.0
19
85
9
53
55
0
0
45
0.99
262452--262498
23
2.0
23
100
0
94
21
38
0
40
1.53
264741--264780
21
1.9
21
89
0
62
10
25
40
25
1.86
264739--264822
20
4.1
20
71
13
62
15
26
35
22
1.94
268619--268658
21
1.9
21
85
10
55
35
10
2
52
1.48

Tables:   1   2

The End!