Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009135.1 Hibiscus syriacus cultivar Beakdansim tig00112635_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87379

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3982--4046
30
2.2
30
83
5
78
35
16
3
44
1.64
12137--12428
91
3.2
92
79
6
315
54
14
7
23
1.65
12439--12501
27
2.3
27
86
0
90
49
17
12
20
1.79
19109--19148
20
2.0
19
85
9
53
55
0
0
45
0.99
27649--27695
23
2.0
23
100
0
94
21
38
0
40
1.53
29942--29981
21
1.9
21
89
0
62
10
25
40
25
1.86
33829--33868
21
1.9
21
85
10
55
35
10
2
52
1.48
37261--37605
92
3.9
89
74
10
287
53
14
7
24
1.68
37361--37536
80
2.2
79
81
4
192
50
14
9
25
1.72
37444--37631
92
2.0
92
83
2
234
54
14
5
25
1.62
37272--37628
172
2.1
172
83
1
437
52
15
7
24
1.69
42929--42992
18
3.6
18
73
23
62
51
26
14
7
1.69
46039--46097
29
2.0
29
96
0
109
49
11
13
25
1.76
50648--50706
29
2.0
29
100
0
118
49
13
13
23
1.78
50998--51032
14
2.5
14
90
0
61
74
0
0
25
0.82
61467--61540
30
2.5
30
95
2
132
33
16
6
43
1.74
65119--65157
20
2.0
20
84
0
51
38
28
10
23
1.87
65153--65216
20
3.0
20
84
11
58
42
23
17
17
1.89
65167--65241
20
3.8
21
84
12
95
48
18
16
17
1.82
65286--65353
20
3.3
20
74
11
75
26
29
16
27
1.97
65385--65426
22
1.9
22
85
9
59
30
11
26
30
1.92
65637--65698
20
3.1
20
76
0
70
22
17
17
41
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67742--67774
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!