Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009136.1 Hibiscus syriacus cultivar Beakdansim tig00112636_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  240531

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
160369--160450
36
2.2
36
95
2
146
39
17
12
31
1.86
160442--160525
5
17.0
5
95
2
152
58
0
1
40
1.06
169031--169069
20
2.0
19
85
5
51
41
12
7
38
1.72
190398--190439
18
2.3
18
95
0
75
23
21
28
26
1.99
190838--190923
37
2.3
38
78
15
106
45
0
3
51
1.18
191062--191106
20
2.4
19
82
10
65
22
24
8
44
1.81
191069--191106
20
1.9
20
94
0
67
21
23
10
44
1.83
194359--194392
6
5.7
6
100
0
68
17
0
64
17
1.29
197963--198072
57
1.9
56
83
5
141
53
1
10
33
1.46
198459--198498
2
20.0
2
92
0
62
45
0
2
52
1.14
198961--199024
25
2.6
25
100
0
128
59
6
10
23
1.54
202990--203014
3
8.3
3
100
0
50
64
0
0
36
0.94
209801--209828
2
14.0
2
100
0
56
50
0
0
50
1.00
233348--233400
23
2.3
23
96
0
97
28
22
16
32
1.96
237180--237212
11
3.0
11
100
0
66
36
18
36
9
1.82

Tables:   1   2

The End!