Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009162.1 Hibiscus syriacus cultivar Beakdansim tig00112697_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  148633

Tables:   1   2   

This is table  2  of  2  ( 147 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
130359--130420
19
3.2
19
93
6
99
67
0
0
32
0.91
130361--130421
10
6.2
10
88
11
99
68
0
0
31
0.89
130359--130421
16
3.9
16
80
16
76
68
0
0
31
0.90
130696--130937
40
5.7
41
74
10
170
23
19
31
25
1.98
130620--130927
40
7.2
41
71
15
130
25
18
30
25
1.98
130647--130930
46
6.6
45
73
14
170
25
19
29
25
1.98
130613--130927
129
2.4
129
93
1
542
24
19
30
25
1.98
131613--131687
31
2.4
30
82
8
80
40
13
14
32
1.85
131781--132289
64
8.2
64
68
19
215
44
12
13
30
1.80
131803--132025
119
1.9
119
81
9
276
42
12
14
30
1.83
132137--132263
37
3.6
37
68
16
108
45
11
10
32
1.74
132146--132279
67
2.0
68
95
1
243
45
11
10
32
1.75
132084--132298
67
3.3
66
83
6
226
46
13
10
29
1.76
132241--132671
29
14.8
28
74
13
311
46
15
11
27
1.79
132251--132373
27
4.5
27
87
4
174
47
16
9
26
1.77
132189--132690
149
3.4
149
93
2
832
46
14
11
27
1.79
132914--133219
36
8.8
36
69
15
144
35
12
18
33
1.89
133765--133802
4
10.0
4
83
11
53
26
0
23
50
1.50
136812--136842
5
6.2
5
100
0
62
41
19
19
19
1.90
136854--136915
32
2.0
32
96
3
117
61
9
14
14
1.57
139199--139225
9
3.0
9
100
0
54
55
0
0
44
0.99
139220--139251
3
10.7
3
100
0
64
34
0
0
65
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139199--139251
18
2.9
18
88
0
70
45
0
0
54
0.99
140408--140445
13
2.7
14
84
12
51
23
7
2
65
1.32
140404--140472
35
2.0
35
85
5
95
24
7
1
66
1.25
140537--140584
22
2.2
21
78
10
51
25
2
6
66
1.26
141561--141619
2
29.5
2
96
0
109
47
0
0
52
1.00

Tables:   1   2

The End!