Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000918.1 Hibiscus syriacus cultivar Beakdansim tig00001831_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59266

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1182--1265
23
3.7
23
95
0
141
19
26
32
22
1.97
10787--10965
31
5.8
31
90
3
256
19
17
22
39
1.92
11515--11554
21
1.9
21
100
0
80
25
22
27
25
2.00
11582--11612
12
2.6
12
94
0
53
12
9
25
51
1.70
20132--20214
35
2.4
34
92
4
132
33
9
16
39
1.82
20232--20341
36
3.1
36
77
5
125
40
16
20
23
1.91
20406--20479
36
2.1
36
86
0
103
37
14
21
25
1.92
20363--20632
102
2.7
102
82
4
314
38
13
19
28
1.89
20552--20690
65
2.1
65
84
5
174
38
12
20
28
1.89
20428--20743
167
1.9
167
92
0
533
38
12
19
28
1.89
20775--20914
72
1.9
75
89
5
223
40
11
20
27
1.87
20811--20930
36
3.3
36
71
13
120
42
13
18
25
1.87
20758--20933
72
2.4
73
82
8
214
41
11
18
27
1.86
21993--22346
183
1.9
183
94
1
620
30
20
20
27
1.98
24645--24694
25
1.9
27
88
8
77
54
2
0
44
1.11
25083--25196
56
2.0
57
84
5
151
44
8
7
38
1.65
26007--26053
13
3.5
13
91
2
67
17
53
21
8
1.70
44984--45060
30
2.6
30
87
0
109
29
27
10
32
1.90
45282--45454
86
2.0
86
90
0
274
26
23
18
31
1.98

Tables:   1

The End!