Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009188.1 Hibiscus syriacus cultivar Beakdansim tig00112761_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  189620

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139637--139716
40
2.0
40
80
11
92
48
7
0
43
1.31
140317--140442
59
2.1
59
85
5
166
34
15
16
34
1.90
143413--143452
13
3.1
13
88
0
62
42
17
25
15
1.88
151548--151622
36
2.1
36
97
0
141
46
14
10
28
1.78
159176--159218
12
3.7
12
84
3
61
32
0
41
25
1.56
163863--163917
12
4.7
12
84
2
58
30
0
36
32
1.58
163868--163917
24
2.1
24
88
3
75
32
0
38
30
1.58
165798--165847
18
2.8
18
100
0
100
44
6
10
40
1.63
169137--169172
17
2.1
17
90
10
56
52
0
0
47
1.00
173764--173819
19
2.9
19
85
12
78
16
21
28
33
1.95
173764--173812
10
4.8
11
83
16
70
16
20
26
36
1.93
173765--173819
9
5.6
10
83
12
78
14
21
29
34
1.93
173832--173862
13
2.4
13
94
0
53
16
48
19
16
1.81
173881--173956
29
2.6
29
87
0
98
21
9
27
42
1.83
181033--181076
9
4.6
10
83
11
65
13
22
29
34
1.93
181032--181076
19
2.4
19
96
0
81
15
22
28
33
1.95
181042--181089
19
2.5
19
79
0
51
16
27
27
29
1.97
181089--181119
13
2.4
13
94
0
53
16
48
19
16
1.81
181138--181213
29
2.6
29
87
0
98
21
9
27
42
1.83
182558--182597
19
2.1
19
86
9
55
30
10
5
55
1.54

Tables:   1   2

The End!