Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009205.1 Hibiscus syriacus cultivar Beakdansim tig00112791_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  274913

Tables:   1   2   

This is table  2  of  2  ( 130 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
269743--269835
3
31.0
3
95
0
168
66
0
1
32
0.99
270091--270748
113
5.8
113
93
1
1072
30
18
14
35
1.91
271539--271965
85
5.1
85
94
0
682
35
23
13
27
1.92
272728--272780
16
3.1
16
81
8
61
49
5
9
35
1.59
273111--273174
1
64.0
1
74
0
56
0
12
0
87
0.54
273114--273176
7
9.1
7
86
10
78
0
14
0
85
0.59
273103--273172
23
3.0
24
85
10
99
0
14
0
85
0.59
273111--273174
29
2.2
29
89
8
103
0
12
0
87
0.54
273102--273176
9
8.1
9
78
11
80
0
14
0
85
0.60
273102--273174
11
6.5
11
77
17
78
0
13
0
86
0.58

Tables:   1   2

The End!