Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000922.1 Hibiscus syriacus cultivar Beakdansim tig00001839_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68411

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4919--5485
288
2.0
286
94
3
989
39
10
13
36
1.79
7129--7183
23
2.4
23
87
6
76
29
20
29
21
1.98
8222--8266
21
2.1
22
87
4
65
26
15
6
51
1.68
8742--8779
20
1.9
20
88
0
58
26
18
18
36
1.94
8787--8948
64
2.5
64
80
5
193
24
23
19
32
1.97
13912--14055
64
2.2
64
82
6
175
25
22
19
32
1.97
13996--14094
45
2.2
45
100
0
198
22
18
20
39
1.92
19721--19766
22
2.1
22
100
0
92
26
17
13
43
1.85
26652--26717
26
2.5
27
83
11
84
42
3
3
51
1.32
29748--30003
141
1.8
141
88
0
397
39
9
16
34
1.81
30834--30897
2
31.5
2
93
3
110
50
1
0
48
1.10
48974--49086
57
2.0
58
89
5
176
41
16
25
15
1.88
56960--57033
15
5.2
14
74
12
62
31
2
4
62
1.28
56944--56989
20
2.2
20
81
11
58
26
2
4
67
1.21
56971--57025
13
4.2
13
77
11
58
32
1
3
61
1.24
56966--57033
28
2.4
28
97
0
127
30
2
4
61
1.30
56983--57035
16
3.6
16
75
19
69
33
3
1
60
1.26
61189--61348
79
2.0
79
90
0
248
49
14
11
25
1.76
62518--62555
18
2.1
18
90
0
58
34
7
5
52
1.53
62634--62694
25
2.4
25
97
0
113
40
4
8
45
1.55
62634--62694
13
4.8
13
72
20
58
40
4
8
45
1.55
65055--65094
20
2.0
20
85
5
53
55
7
10
27
1.60

Tables:   1

The End!