Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009221.1 Hibiscus syriacus cultivar Beakdansim tig00112812_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  265395

Tables:   1   2   

This is table  2  of  2  ( 153 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
192777--193023
4
61.8
4
99
0
485
50
24
0
25
1.50
193250--193292
19
2.4
18
88
7
61
27
23
2
46
1.64
193385--193586
2
104.0
2
67
23
85
45
3
2
48
1.36
193501--193580
11
7.6
11
73
18
64
46
1
2
50
1.23
193498--193578
29
2.7
27
83
12
90
46
1
2
49
1.23
201200--201235
13
2.8
13
86
0
54
61
8
8
22
1.51
203504--203528
13
1.9
13
100
0
50
76
0
0
24
0.80
204181--204223
14
3.1
14
86
3
61
51
2
0
46
1.13
204398--204433
16
2.2
16
95
0
63
36
36
13
13
1.85
215581--215614
17
1.9
18
88
5
52
67
0
14
17
1.23
215644--215671
4
7.0
4
100
0
56
75
0
0
25
0.81
215656--215819
45
3.7
44
80
10
181
65
0
8
25
1.20
215743--215819
41
1.9
40
86
7
111
67
0
9
23
1.19
216905--217022
17
7.4
17
76
19
96
62
0
0
35
1.07
216897--217038
10
13.7
10
72
21
82
60
1
0
37
1.11
216896--217020
37
3.2
39
79
15
141
63
0
0
35
1.06
217713--217769
15
3.7
15
77
9
69
22
35
26
15
1.94
217717--217779
32
2.0
32
93
0
108
25
34
22
17
1.95
217713--217781
15
4.3
16
75
10
52
23
33
26
17
1.96
217807--217861
15
3.4
16
85
7
76
25
30
30
12
1.93
229928--229975
20
2.4
20
100
0
96
35
22
22
18
1.96
232117--232179
18
3.7
16
77
14
56
7
68
3
20
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
232091--232173
33
2.5
33
80
7
89
8
67
3
20
1.33
233714--233777
28
2.2
28
83
8
76
59
4
1
34
1.28
233785--233827
15
2.6
16
79
17
52
53
2
2
41
1.26
235195--235305
41
2.7
41
94
0
186
35
19
9
35
1.85
238006--238051
17
2.7
17
86
6
58
34
2
0
63
1.07
241039--241068
2
15.0
2
100
0
60
50
0
0
50
1.00
246905--246945
20
2.2
20
86
8
59
0
9
9
80
0.91
246918--246961
15
2.8
15
93
6
70
0
9
9
81
0.87
251966--252005
2
20.0
2
94
0
71
52
0
0
47
1.00
253231--253279
15
3.1
16
76
5
55
30
2
6
61
1.32
258787--258822
17
2.1
18
89
5
56
55
2
0
41
1.14

Tables:   1   2

The End!