Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009321.1 Hibiscus syriacus cultivar Beakdansim tig00113080_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39803

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9736--9796
13
5.0
13
72
20
51
29
0
3
67
1.07
9729--9795
32
2.1
32
88
5
100
28
0
4
67
1.10
9737--9796
19
3.2
20
73
21
58
30
0
3
66
1.07
13553--13587
17
2.0
18
88
5
54
57
0
0
42
0.99
22411--22509
21
4.8
20
75
6
81
37
23
18
21
1.94
22476--22778
20
15.1
20
87
1
338
37
24
18
20
1.94
23467--23512
24
2.0
23
87
12
67
26
15
21
36
1.93
25939--26103
33
4.7
34
81
13
183
46
18
21
13
1.83
25953--26141
19
10.7
19
78
17
219
45
17
21
15
1.85
25939--26141
52
3.9
52
86
10
281
45
18
21
14
1.85
26112--26226
52
2.2
52
86
4
160
19
23
18
39
1.92
26149--26246
19
5.4
19
84
13
143
14
22
17
45
1.84
26131--26246
52
2.2
52
96
3
216
13
24
18
43
1.86
26352--26388
14
2.6
14
91
0
65
45
21
0
32
1.52
28367--28423
14
3.7
14
77
20
60
45
22
21
10
1.82
28348--28440
33
2.8
33
95
0
168
47
21
20
10
1.80
28311--28445
19
7.6
19
76
16
128
45
23
19
11
1.82
28441--28569
19
7.3
19
75
17
125
8
17
28
45
1.77
28441--28532
33
2.8
33
93
3
150
7
18
28
45
1.76
28617--29083
93
5.1
93
97
1
886
46
19
12
21
1.83

Tables:   1

The End!