Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009454.1 Hibiscus syriacus cultivar Beakdansim tig00113688_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  170847

Tables:   1   2   

This is table  2  of  2  ( 156 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
135660--135726
17
4.1
17
85
12
86
19
13
4
62
1.47
135696--135723
14
2.0
14
100
0
56
14
14
0
71
1.15
143891--143952
32
1.9
32
96
0
115
38
22
9
29
1.86
144699--144731
15
2.3
14
94
5
57
36
0
6
57
1.23
145167--145201
17
2.1
17
100
0
70
48
11
17
22
1.79
146202--146376
5
37.6
5
75
16
72
68
0
4
26
1.09
146199--146376
50
3.8
45
75
20
157
68
0
4
26
1.08
146217--146364
9
16.3
9
76
14
99
70
0
4
25
1.07
146200--146379
41
4.3
41
83
8
179
68
0
4
26
1.08
146200--146403
13
16.7
12
67
25
83
69
0
3
25
1.12
146200--146409
9
23.1
8
72
22
86
69
1
3
25
1.14
147960--148001
20
2.0
20
82
13
50
54
21
2
21
1.56
148728--148770
21
2.0
21
100
0
86
39
9
0
51
1.34
149196--149238
21
2.0
21
100
0
86
46
13
0
39
1.44
149365--149404
11
4.0
11
75
24
52
42
0
10
47
1.37
149369--149404
18
2.0
18
100
0
72
38
0
11
50
1.38
149843--149896
3
17.7
3
81
11
65
40
0
0
59
0.98
149838--149895
19
3.2
19
90
7
93
43
0
0
56
0.99
149844--149924
30
2.7
32
74
20
68
41
0
0
58
0.98
150033--150186
76
2.0
76
100
0
308
34
18
10
37
1.85
150727--150755
13
2.2
13
100
0
58
34
20
10
34
1.87
152218--152251
17
2.0
17
100
0
68
23
11
0
64
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
152359--152400
21
2.0
21
100
0
84
52
14
4
28
1.62
154515--154601
20
4.2
20
72
23
74
51
0
0
48
1.00
154513--154612
35
3.2
31
81
17
127
53
0
0
47
1.00
154511--154612
15
6.6
15
80
17
120
52
0
0
47
1.00
154522--154610
35
2.6
36
92
3
139
53
0
0
46
1.00
154511--154605
44
2.2
44
83
7
113
52
0
0
47
1.00
155895--155929
17
2.1
17
100
0
70
48
5
11
34
1.63
156097--156154
28
2.3
23
75
25
64
34
8
18
37
1.82
156104--156160
28
2.0
28
100
0
114
35
10
21
33
1.87
160214--160251
18
2.1
18
100
0
76
52
15
5
26
1.64
160801--160826
13
2.0
13
100
0
52
38
0
7
53
1.30
161894--161930
18
2.1
18
100
0
74
5
16
21
56
1.59
166994--167028
17
2.1
17
100
0
70
22
17
11
48
1.79
168236--168293
30
1.9
30
96
0
107
31
10
24
34
1.89

Tables:   1   2

The End!