Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009467.1 Hibiscus syriacus cultivar Beakdansim tig00114116_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49471

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5475--5507
11
3.0
11
90
0
57
15
36
39
9
1.79
5896--6085
33
5.6
33
77
12
197
15
31
35
17
1.91
5874--6093
105
2.1
106
96
0
406
15
33
34
16
1.91
5826--6261
137
3.2
136
77
12
514
16
34
33
16
1.91
6170--6253
32
2.6
33
90
3
127
15
29
35
19
1.92
6340--6421
33
2.5
33
88
2
112
17
30
34
18
1.94
5980--6556
168
3.4
168
94
2
1009
16
33
33
17
1.92
14389--14421
11
3.0
11
90
0
57
15
36
39
9
1.79
14801--14985
33
5.6
32
72
17
128
15
32
34
17
1.92
14779--14994
102
2.1
105
93
4
368
15
34
32
16
1.91
14903--14985
33
2.5
33
92
1
132
15
28
36
19
1.93
14881--15284
163
2.4
165
90
6
647
16
33
31
18
1.93
23564--23749
32
5.6
32
76
14
178
15
31
34
17
1.92
23542--23759
103
2.1
106
95
2
397
15
33
33
16
1.91
23647--24222
168
3.4
169
94
2
1004
16
32
33
17
1.92
23835--23919
33
2.6
33
90
1
127
15
29
35
20
1.93
24006--24086
33
2.5
32
84
4
101
17
29
34
18
1.94
24205--24246
20
2.1
20
100
0
84
19
30
40
9
1.83
37038--37255
32
6.6
32
74
15
165
16
31
35
16
1.92
37015--37300
135
2.1
138
96
1
533
17
32
33
15
1.92
37173--37257
33
2.6
33
92
1
136
15
29
36
18
1.92
37038--37727
168
4.1
167
89
5
979
16
32
33
16
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37341--37425
33
2.6
33
88
1
118
16
30
35
17
1.92
37512--37593
33
2.5
33
84
2
103
17
29
34
19
1.94

Tables:   1

The End!