Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009475.1 Hibiscus syriacus cultivar Beakdansim tig00114196_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22427

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11276--11354
32
2.6
29
81
13
95
21
34
29
15
1.94
11408--11539
32
4.2
32
92
2
196
18
37
30
14
1.90
11586--11718
62
2.1
62
95
2
241
13
39
36
10
1.79
11504--11790
156
1.8
157
89
5
456
15
35
36
12
1.85
11753--11885
32
4.2
32
89
1
187
18
35
30
15
1.92
11753--11885
65
2.1
63
87
2
185
18
35
30
15
1.92
11347--12002
345
1.9
346
94
1
1165
17
34
34
13
1.89
11648--12033
95
4.1
93
71
11
338
17
33
36
12
1.88
20222--20310
33
2.8
32
82
1
115
20
37
28
14
1.92
20357--20493
32
4.3
32
92
2
206
18
37
29
13
1.89
20539--20644
31
3.4
31
67
17
92
13
41
34
10
1.78
20534--20669
62
2.2
63
97
1
256
13
38
38
9
1.77
20597--20981
94
4.1
94
71
9
343
16
33
36
12
1.87
20702--20834
32
4.2
32
88
2
187
18
36
30
15
1.91

Tables:   1

The End!