Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009525.1 Hibiscus syriacus cultivar Beakdansim tig00115986_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28070

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2555--2585
10
2.9
11
90
9
55
9
38
41
9
1.71
2974--3192
33
6.6
33
75
17
186
16
31
35
16
1.92
3044--3103
30
2.0
31
93
3
104
21
31
33
13
1.92
2956--3232
134
2.0
135
96
2
511
17
32
34
15
1.91
2974--3190
65
3.3
65
72
16
237
16
30
35
17
1.92
3011--3222
65
3.2
65
72
18
220
17
30
36
15
1.91
2974--3667
169
4.1
170
90
3
1007
16
32
34
17
1.92
3277--3361
33
2.6
33
86
1
109
15
30
35
18
1.92
3449--3530
33
2.5
33
84
2
103
17
29
34
19
1.94
11588--11619
11
2.9
11
100
0
64
9
37
43
9
1.69
12011--12231
32
6.6
32
74
15
151
16
30
36
16
1.91
12011--12233
33
6.6
33
75
13
195
16
30
36
16
1.91
11992--12275
138
2.1
137
97
0
541
17
32
34
15
1.91
12011--12707
169
4.1
169
89
4
984
16
32
34
16
1.92
12127--12707
169
3.4
169
94
0
1004
16
32
33
17
1.92
12317--12401
33
2.6
33
86
1
109
15
30
35
18
1.92
12489--12570
33
2.5
33
84
2
103
17
29
34
19
1.94
11942--12537
306
2.0
304
87
5
864
16
32
34
16
1.91

Tables:   1

The End!