Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009537.1 Hibiscus syriacus cultivar Beakdansim tig00116283_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9708

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--369
32
8.0
32
75
13
210
19
34
31
15
1.92
416--548
61
2.1
63
94
4
243
13
39
36
10
1.79
337--620
156
1.8
156
89
4
448
15
35
36
11
1.85
583--715
32
4.2
32
87
2
178
18
36
30
15
1.92
583--715
63
2.1
65
85
2
180
18
36
30
15
1.92
479--862
93
4.1
94
70
13
304
16
34
35
13
1.88
8970--9053
31
2.8
29
75
10
80
21
39
25
14
1.91
9100--9229
31
4.2
32
88
6
178
18
37
29
14
1.90
9098--9229
63
2.1
62
87
4
194
18
37
30
14
1.90
9275--9405
62
2.1
62
93
5
223
13
40
35
10
1.80
9443--9568
32
4.0
31
83
5
146
19
36
29
15
1.92
9130--9537
154
2.6
154
79
7
479
17
36
32
13
1.89
9443--9560
62
1.9
62
84
3
157
20
36
28
14
1.92
9039--9683
340
1.9
341
92
3
1104
17
35
33
13
1.89

Tables:   1

The End!