Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009551.1 Hibiscus syriacus cultivar Beakdansim tig00116465_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12584

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3138--3523
95
4.1
95
71
8
356
12
36
33
17
1.88
3286--3419
33
4.2
32
84
5
171
15
31
35
17
1.92
3454--3585
62
2.1
62
97
1
248
10
37
37
13
1.80
3477--3578
31
3.4
31
67
17
88
11
35
39
13
1.82
3477--3704
92
2.4
93
69
11
214
13
35
35
15
1.87
3630--3762
32
4.2
32
91
2
196
14
30
36
18
1.90
3630--3896
64
4.0
64
72
18
215
14
31
34
19
1.92
3810--3896
33
2.6
33
82
5
104
14
26
36
21
1.93
12024--12410
95
4.1
95
72
8
374
12
36
33
17
1.88
12173--12305
32
4.2
32
86
3
178
15
30
35
18
1.92
12173--12305
31
4.2
31
86
5
167
15
30
35
18
1.92
12173--12305
63
2.1
65
85
2
180
15
30
35
18
1.92
12362--12465
31
3.3
32
68
16
101
11
34
40
13
1.81
12340--12472
62
2.1
62
98
0
257
10
37
38
13
1.79
12268--12552
155
1.8
156
88
5
436
12
37
34
15
1.85
12516--12584
32
2.2
32
91
0
111
14
30
37
17
1.90

Tables:   1

The End!