Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009615.1 Hibiscus syriacus cultivar Beakdansim tig00117001_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  259590

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
219619--220499
422
2.1
418
94
2
1556
37
26
11
24
1.90
223244--223273
2
15.0
2
100
0
60
50
0
0
50
1.00
226356--226394
2
19.5
2
100
0
78
48
0
51
0
1.00
230295--230361
30
2.2
30
89
0
98
46
13
14
25
1.82
231522--231560
20
2.0
21
85
10
55
28
0
30
41
1.57
233307--233372
23
2.9
23
78
13
64
65
9
3
22
1.36
233887--233940
21
2.6
21
69
0
54
25
24
24
25
2.00
235724--235884
65
2.5
65
88
6
229
28
16
22
32
1.96
235725--235934
65
3.2
64
82
8
223
27
17
22
31
1.97
241891--241931
20
2.0
20
86
9
57
34
12
9
43
1.75
245830--245872
17
2.5
17
96
0
77
20
18
27
32
1.96
247725--247777
20
2.6
21
71
17
56
47
9
9
33
1.68
250766--250816
20
2.5
20
93
0
84
49
11
19
19
1.79
253018--253109
46
2.0
46
100
0
184
30
13
21
34
1.91
256399--256532
29
4.5
29
75
7
115
24
35
24
15
1.94
256713--256758
13
3.5
13
87
0
65
17
30
21
30
1.96
257175--257218
21
2.1
21
91
0
70
29
0
15
54
1.42
257195--257251
28
2.0
29
93
3
98
31
0
12
56
1.36

Tables:   1   2

The End!