Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01009642.1 Hibiscus syriacus cultivar Beakdansim tig00117054_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  216009

Tables:   1   2   

This is table  2  of  2  ( 133 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
200158--200220
20
3.2
19
80
10
65
12
20
23
42
1.86
201929--202402
94
5.1
94
96
0
826
21
12
19
46
1.83
202965--203019
19
3.2
19
68
24
57
45
16
21
16
1.85
202965--203044
33
2.4
33
87
0
115
47
20
20
12
1.81
203089--203221
20
7.4
19
74
19
133
15
21
18
43
1.87
203054--203234
33
5.3
33
81
9
218
13
22
19
44
1.86
203227--203300
20
3.7
20
69
16
62
24
17
25
32
1.97
206675--206954
20
13.9
19
72
11
86
21
17
22
38
1.93
206683--206871
60
3.2
60
83
3
254
21
18
20
39
1.92
206678--206927
40
6.2
41
86
0
256
20
18
21
39
1.92
206940--206992
20
2.7
20
88
5
72
13
16
24
45
1.83
207044--207095
20
2.6
20
75
6
61
15
21
32
30
1.94
210711--210750
19
2.1
19
95
0
71
35
22
22
20
1.96

Tables:   1   2

The End!