Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000991.1 Hibiscus syriacus cultivar Beakdansim tig00001985_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  218077

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
185480--185545
21
3.1
21
63
16
55
42
13
3
40
1.60
185476--185563
42
2.1
42
97
0
167
39
14
2
43
1.58
185476--185590
42
2.8
42
86
6
110
44
14
2
38
1.60
186488--186651
29
5.6
29
87
2
213
30
1
18
48
1.59
186534--186586
17
3.4
17
65
24
53
33
0
16
49
1.47
186488--186651
58
2.8
58
88
2
240
30
1
18
48
1.59
187677--187726
25
2.0
25
84
0
64
26
6
22
46
1.74
193905--194063
29
5.4
29
83
2
185
28
5
16
49
1.68
197744--197939
36
5.4
36
80
6
175
27
17
13
41
1.87
197802--197939
72
1.9
72
86
2
197
26
21
12
39
1.89
198198--198352
68
2.3
68
87
3
217
29
20
12
38
1.89
198237--198390
68
2.3
67
81
4
175
29
21
11
37
1.89
198567--199067
140
3.6
139
78
3
560
30
27
15
26
1.96
200192--200247
29
1.9
29
96
0
103
32
16
3
48
1.63
200472--200530
16
3.7
16
72
0
55
30
25
5
38
1.77
200681--200716
16
2.2
16
90
0
54
27
11
5
55
1.57
207027--207081
3
18.3
3
88
0
83
34
3
0
61
1.13
212128--212175
14
3.4
14
76
0
60
16
10
14
58
1.63
212358--212383
13
2.0
13
100
0
52
15
15
15
53
1.73
212354--212406
23
2.3
23
90
0
79
13
15
16
54
1.71

Tables:   1   2

The End!