Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010069.1 Kokia drynarioides strain JFW-HI SEQ_124846, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  122896

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
48
0
0
51
1.00
13--103
37
2.5
36
82
8
121
37
6
0
56
1.26
1053--1098
15
3.1
15
82
14
51
67
0
10
21
1.21
11279--11365
27
3.3
27
90
1
140
36
20
22
19
1.95
22257--22321
28
2.4
27
78
2
67
24
24
20
30
1.98
29477--29655
85
2.1
86
95
2
324
32
8
12
45
1.73
30450--30511
21
3.0
22
79
11
67
69
4
11
14
1.34
31948--32004
28
2.0
28
96
0
105
33
8
17
40
1.81
33195--33234
3
13.3
3
100
0
80
67
0
0
32
0.91
34834--35091
40
6.5
41
78
11
270
26
15
25
32
1.96
34834--35065
79
2.9
78
87
1
329
25
16
25
32
1.96
35729--35760
12
2.7
12
90
0
55
53
12
6
28
1.62
45600--45625
3
8.7
3
100
0
52
69
0
0
30
0.89
50246--50287
10
4.9
9
81
18
54
35
0
7
57
1.26
50449--50495
24
2.0
24
100
0
94
55
6
4
34
1.45
50717--50762
24
2.0
23
86
4
65
30
0
8
60
1.26
50717--50762
23
2.0
23
83
8
58
30
0
8
60
1.26
52798--53783
494
2.0
494
91
1
1593
31
24
16
28
1.96
65866--65891
3
8.7
3
100
0
52
34
0
30
34
1.58
65890--65925
3
12.0
3
93
0
63
69
0
0
30
0.89
67760--67804
20
2.2
21
88
4
65
26
2
2
68
1.12
73065--73260
50
3.9
50
90
4
290
34
4
10
51
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73057--73284
50
4.6
50
85
6
286
32
4
10
52
1.58
73065--73260
101
2.0
99
90
4
313
34
4
10
51
1.56
75492--75857
183
2.0
183
100
0
732
23
13
23
39
1.90
89882--90131
123
2.0
123
95
0
446
29
11
18
40
1.86
102037--102086
24
2.0
26
88
7
77
38
0
0
62
0.96
102354--102378
13
1.9
13
100
0
50
0
12
0
88
0.53
107417--107501
42
2.0
41
82
6
100
56
2
0
41
1.12
118440--118473
13
2.6
13
85
0
50
47
0
2
50
1.16
119729--119754
3
8.7
3
100
0
52
34
0
30
34
1.58
120205--120261
28
2.0
28
80
12
64
56
5
1
36
1.32
120556--120608
18
3.2
16
75
15
54
58
1
1
37
1.20
120604--120649
19
2.5
20
86
13
71
41
8
0
50
1.33
120608--120647
18
2.2
18
91
8
64
40
10
0
50
1.36
120672--120708
19
2.0
19
89
5
58
29
5
8
56
1.51
120677--120715
18
2.1
19
85
4
53
38
5
7
48
1.54
121841--121944
17
6.4
16
76
16
81
45
0
1
52
1.11
121840--121944
6
18.2
6
75
14
105
44
0
1
53
1.11
121836--121924
29
3.1
29
88
4
119
41
0
2
56
1.12
121836--121941
35
3.5
29
77
17
99
43
0
1
54
1.11
122531--122606
3
25.0
3
77
7
73
60
2
0
36
1.11
122534--122578
16
2.8
16
83
12
65
60
2
0
37
1.09

Tables:   1

The End!