Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010316.1 Kokia drynarioides strain JFW-HI SEQ_125178, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  389999

Tables:   1   2   

This is table  2  of  2  ( 156 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
300444--300711
90
3.0
92
85
4
350
36
2
26
35
1.69
302522--302562
17
2.4
17
91
0
64
51
4
0
43
1.23
302740--302817
30
2.5
31
78
17
83
43
7
8
39
1.65
305691--305724
9
3.9
9
88
7
52
44
0
0
55
0.99
309954--309995
20
2.0
21
90
4
68
38
4
2
54
1.34
311077--311124
24
2.0
24
83
0
60
20
27
2
50
1.60
316383--316424
17
2.4
17
92
4
66
21
26
2
50
1.61
326668--326696
12
2.3
13
94
5
51
82
0
17
0
0.66
326668--326705
19
1.9
19
89
5
58
81
0
15
2
0.80
327776--327880
43
2.4
43
91
0
174
22
34
22
20
1.97
330513--330539
14
1.9
14
100
0
54
51
3
0
44
1.19
332103--332129
13
2.1
13
100
0
54
62
14
0
22
1.31
337068--337113
22
2.1
22
95
0
83
45
8
23
21
1.80
338463--338489
8
3.4
8
100
0
54
66
11
0
22
1.22
338720--338767
3
16.0
3
100
0
96
33
0
0
66
0.92
348709--348789
26
3.3
25
77
16
80
35
20
28
14
1.93
348720--348799
22
3.5
22
81
13
83
40
22
23
13
1.90
352776--352818
11
3.8
11
80
17
52
30
2
2
65
1.18
352779--352822
23
1.9
23
90
0
70
31
2
4
61
1.28
354105--354167
2
31.5
2
93
0
108
50
0
3
46
1.17
370149--370187
19
2.0
20
90
5
62
79
0
7
12
0.93
371387--371578
93
2.1
93
90
0
303
27
19
20
31
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
372271--372314
22
2.0
22
82
8
54
38
2
2
56
1.24
375054--375213
58
2.8
56
78
11
164
26
16
16
40
1.90
375095--375237
58
2.4
59
78
8
148
28
15
16
39
1.89
379317--379351
17
2.1
16
89
5
52
54
0
8
37
1.31
379486--379734
131
1.9
127
84
7
306
48
6
3
42
1.45
379569--379643
37
2.0
37
94
0
132
40
10
5
44
1.62
379757--379907
51
3.1
51
62
21
124
42
7
4
45
1.54
379606--379914
94
3.3
94
93
2
541
45
7
4
42
1.52
379983--380030
22
2.2
22
88
0
69
35
47
2
14
1.56
381899--381931
12
2.6
13
85
9
50
63
3
0
33
1.10
382104--382139
18
2.1
18
89
5
56
33
25
0
41
1.55
389088--389120
12
2.6
13
85
9
50
63
3
0
33
1.10
389293--389328
18
2.1
18
89
5
56
33
25
0
41
1.55
389700--389742
17
2.7
15
80
13
50
0
37
2
60
1.10

Tables:   1   2

The End!