Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010448.1 Kokia drynarioides strain JFW-HI SEQ_125343, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15896

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1041--1116
28
2.6
28
84
10
91
57
6
9
26
1.54
1051--1129
28
2.8
30
81
14
89
54
12
7
25
1.64
1571--1676
49
2.1
49
84
5
133
54
8
9
27
1.61
1979--2036
21
2.7
21
74
15
64
36
6
15
41
1.74
6553--6635
41
2.0
41
100
0
166
14
14
0
71
1.16
7087--7154
35
2.0
36
82
8
88
79
1
11
7
0.99
11580--11624
17
2.7
17
93
3
74
42
0
6
51
1.28
11661--11729
15
4.5
15
78
3
75
42
26
13
18
1.87
11652--11729
31
2.5
31
83
2
95
44
24
12
17
1.84
12306--12348
19
2.2
20
84
12
54
44
0
2
53
1.13
13617--14073
29
15.3
29
70
15
227
32
29
3
34
1.74
13627--13823
67
3.1
65
84
11
271
31
28
4
35
1.77
13694--14083
59
6.7
58
77
10
230
32
28
3
35
1.75
13706--13927
88
2.5
86
83
5
241
33
30
3
32
1.75
13697--13981
147
1.9
146
85
0
390
32
30
3
34
1.74
13706--14083
147
2.6
147
80
2
386
32
29
3
34
1.75
14350--14541
96
2.0
95
84
9
248
29
21
14
34
1.93

Tables:   1

The End!