Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010463.1 Kokia drynarioides strain JFW-HI SEQ_125361, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98621

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5954--5996
18
2.4
19
84
11
63
65
0
0
34
0.93
5954--5996
9
4.8
9
80
8
52
65
0
0
34
0.93
5956--6004
9
5.1
10
80
14
50
67
0
0
32
0.91
12563--12624
15
4.1
15
74
25
51
19
11
0
69
1.18
12842--12930
44
2.0
44
91
4
144
51
4
17
25
1.64
14029--14057
3
9.7
3
100
0
58
0
34
0
65
0.93
17238--17297
30
2.0
30
83
0
75
25
13
16
45
1.84
19171--19205
17
2.1
17
88
0
52
34
0
5
60
1.21
26093--26157
29
2.2
29
86
5
85
30
7
21
40
1.81
26100--26159
29
2.0
30
90
6
95
28
6
23
41
1.79
30051--30198
75
2.0
75
95
0
269
47
10
14
27
1.77
43535--43576
22
1.9
22
85
9
59
59
4
14
21
1.53
43566--43597
6
5.7
6
92
7
50
84
0
15
0
0.63
55584--55635
25
2.1
25
96
3
97
59
3
0
36
1.16
62186--62247
28
2.2
28
80
11
74
40
0
0
59
0.97
65593--65660
34
2.0
34
97
0
127
30
20
13
35
1.91
67424--67753
30
11.2
28
75
12
195
32
1
27
38
1.67
67446--67726
59
4.8
58
73
13
168
32
2
27
38
1.69
67578--67752
59
2.9
59
80
9
169
34
1
25
38
1.66
67672--67754
31
2.7
31
78
15
93
34
0
28
36
1.58
73368--73412
23
1.9
23
82
13
56
53
2
8
35
1.45
89396--89470
24
3.1
24
88
0
105
56
10
10
22
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97141--97186
19
2.4
19
81
3
56
71
8
2
17
1.21
97141--97191
20
2.5
20
81
6
59
70
7
1
19
1.21

Tables:   1

The End!