Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010523.1 Kokia drynarioides strain JFW-HI SEQ_125436, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107489

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--61
25
2.5
22
71
17
53
8
25
20
44
1.80
1001--1027
4
6.8
4
100
0
54
77
0
22
0
0.76
2924--3333
98
4.2
98
87
1
577
37
16
24
21
1.93
2924--3495
198
3.0
194
84
5
713
36
17
25
20
1.94
2924--3331
49
8.3
49
75
4
329
37
16
25
21
1.93
3253--3409
82
1.9
83
89
1
244
36
17
24
21
1.94
3336--3489
49
3.2
48
69
8
123
34
18
28
18
1.95
4279--4313
18
1.9
18
94
0
61
11
42
20
25
1.85
6084--19086
339
38.1
340
79
5
12288
28
16
18
35
1.93
11710--11914
103
2.0
103
96
0
374
33
19
26
20
1.96
27773--27797
13
1.9
13
100
0
50
48
12
16
24
1.79
34031--34076
22
2.1
22
91
0
74
60
2
23
13
1.43
35895--35946
8
6.5
8
84
8
52
76
3
0
19
0.93
40170--40212
19
2.3
19
91
0
68
37
20
6
34
1.80
56011--56056
23
2.0
23
91
0
74
32
23
30
13
1.93
61323--61351
2
14.5
2
100
0
58
51
0
0
48
1.00
62009--62059
25
2.0
25
100
0
102
29
31
11
27
1.92
67741--67788
24
1.9
26
83
8
64
41
18
8
31
1.80
81728--81776
24
2.0
24
100
0
98
24
4
12
59
1.50
89485--89539
5
10.8
5
78
3
56
25
0
3
70
1.03
89598--89705
6
19.0
6
71
11
84
40
0
1
57
1.09
89598--89739
17
8.4
17
76
6
92
42
0
2
53
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89593--89675
29
2.9
29
89
3
125
39
0
2
57
1.12
89637--89693
23
2.4
24
94
2
80
40
0
0
59
0.97
95602--96418
209
3.9
209
89
1
1185
36
18
22
21
1.95
95602--96407
417
1.9
417
88
3
1219
36
19
22
21
1.95
96355--96450
37
2.6
37
96
0
174
34
20
20
23
1.97
96854--96926
17
4.4
17
82
1
85
34
0
4
61
1.15
96859--96908
16
3.1
16
82
5
55
28
0
4
68
1.08
96883--96962
34
2.4
34
87
2
108
46
1
5
47
1.32
96883--96964
17
4.9
16
76
18
62
45
1
4
48
1.31
98162--98222
25
2.4
26
75
2
70
45
3
24
26
1.68
98687--98866
30
6.1
28
75
11
110
35
23
5
35
1.77
98666--98807
60
2.4
61
80
7
157
37
20
4
37
1.74
98765--99073
30
10.4
29
71
12
157
33
23
5
36
1.79
98881--99073
88
2.2
87
80
6
210
33
24
5
36
1.79
99030--99122
29
3.2
28
82
8
107
34
26
10
27
1.90
99032--99120
28
3.1
28
80
7
108
33
26
11
28
1.91
99679--99726
15
3.1
15
84
6
60
70
0
6
22
1.09
105920--105967
25
1.9
25
86
0
69
33
4
2
60
1.27
107302--107401
18
5.7
17
79
4
110
42
1
3
54
1.22
107302--107395
17
5.3
19
79
13
76
42
1
3
53
1.24
107335--107395
6
10.5
6
74
13
56
42
1
3
52
1.27
107302--107401
52
1.9
53
83
2
130
42
1
3
54
1.22

Tables:   1

The End!