Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010720.1 Kokia drynarioides strain JFW-HI SEQ_125671, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48951

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14244--14279
19
1.9
18
88
5
54
63
5
2
27
1.30
16704--16761
19
3.0
20
90
5
68
58
12
3
25
1.49
16722--16758
10
3.8
10
85
7
58
56
10
5
27
1.55
16720--16759
19
2.2
18
95
4
71
60
10
5
25
1.49
17558--17628
36
2.0
36
100
0
142
35
19
25
19
1.96
23482--23516
18
1.9
18
88
0
52
28
11
22
37
1.89
23793--23832
20
2.0
20
85
9
55
25
25
0
50
1.50
28050--28247
97
2.0
97
91
1
317
33
8
15
42
1.77
28184--28392
91
2.3
91
85
3
260
31
12
14
40
1.84
28327--28395
29
2.3
29
80
5
75
27
14
15
42
1.86
29358--29419
29
2.1
29
90
0
97
20
11
19
48
1.79
29513--29542
13
2.3
13
94
0
51
33
10
6
50
1.62
31610--31665
11
5.0
11
75
12
51
16
8
25
50
1.74
32532--32566
12
3.0
12
91
4
54
17
8
17
57
1.64
32851--32875
13
1.9
13
100
0
50
24
24
8
44
1.80
33520--33568
3
16.3
3
95
0
89
0
30
0
69
0.89
34068--34124
30
1.9
29
86
10
80
47
3
3
45
1.37
40163--40227
28
2.1
32
83
13
84
41
1
0
56
1.08
42384--42521
10
14.9
9
70
17
77
65
2
2
30
1.16
42390--42528
55
2.5
54
80
11
140
66
2
2
28
1.18
42406--42548
46
3.1
45
79
13
132
65
1
2
31
1.13
43070--43110
20
2.0
20
85
0
55
29
0
2
68
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43146--43237
9
10.5
8
70
18
51
34
3
1
60
1.20
43146--43178
17
1.9
17
88
11
50
33
0
0
66
0.92
43049--43224
29
6.2
27
73
12
97
35
2
3
59
1.27

Tables:   1

The End!