Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010873.1 Kokia drynarioides strain JFW-HI SEQ_125841, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48668

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--7486
216
34.5
215
77
7
6279
28
16
14
40
1.88
13--7486
430
17.3
429
77
6
6515
28
16
14
40
1.88
1996--2109
60
1.9
60
96
0
210
27
11
8
52
1.66
13--7486
645
11.5
646
77
6
6324
28
16
14
40
1.88
10019--10057
11
3.5
11
89
10
53
0
17
10
71
1.12
19813--19850
20
2.0
20
89
5
60
10
13
0
76
1.02
25667--25761
50
1.9
49
87
6
138
35
10
17
35
1.85
25649--25779
50
2.7
49
75
11
133
35
11
15
38
1.83
25995--26027
17
1.9
17
88
11
50
66
6
0
27
1.15
26644--26680
15
2.4
16
82
13
51
21
35
16
27
1.94
30002--30060
26
2.3
25
80
13
66
69
10
16
3
1.30
39540--41281
431
4.1
430
80
5
1885
42
13
16
27
1.86
40616--41200
217
2.7
216
85
3
728
44
13
15
26
1.83
39547--41281
216
8.1
216
82
4
1783
42
13
16
27
1.86
42113--43368
214
5.8
214
84
2
1387
39
14
18
27
1.89
42119--43366
429
2.9
425
83
3
1477
39
14
18
27
1.90
43356--44312
217
4.4
216
81
3
1025
40
14
16
27
1.88
43358--44300
429
2.2
430
82
3
1149
41
14
16
27
1.87
44144--44684
190
2.8
190
93
1
888
41
15
16
26
1.88
44497--45800
216
6.0
214
85
3
1564
42
13
16
27
1.86
44510--45803
431
3.0
431
86
3
1699
42
13
16
27
1.86
45805--47655
216
8.6
215
82
3
2066
29
16
13
40
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45805--47655
430
4.3
429
85
3
2161
29
16
13
40
1.87
45805--47655
646
2.9
639
84
4
2234
29
16
13
40
1.87
47785--47830
19
2.4
18
82
10
56
10
8
4
76
1.15

Tables:   1

The End!