Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01010939.1 Kokia drynarioides strain JFW-HI SEQ_125907, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  302541

Tables:   1   2   

This is table  2  of  2  ( 143 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
246299--246346
16
2.9
17
75
9
55
35
0
0
64
0.94
269422--269493
16
4.5
16
89
5
110
45
0
20
33
1.52
272695--273069
59
6.4
58
83
7
238
32
32
5
29
1.79
272703--273069
147
2.5
146
86
6
485
32
32
5
29
1.80
272805--273109
59
5.2
59
87
3
397
32
32
5
29
1.80
276089--276134
24
1.9
23
86
8
65
30
4
8
56
1.49
283799--283984
93
2.0
93
97
0
354
30
23
17
28
1.97
284642--284695
17
3.2
17
81
0
72
51
5
0
42
1.25
285600--286375
49
15.8
49
70
8
490
19
26
18
36
1.94
285588--286381
98
8.1
98
87
1
1047
19
25
18
36
1.94
285588--286381
197
4.0
196
88
1
1067
19
25
18
36
1.94
287398--287438
16
2.7
15
85
7
64
7
21
0
70
1.11
288311--288343
16
2.1
16
88
5
50
3
24
0
72
0.98
293985--294031
17
2.8
17
90
6
69
51
4
0
44
1.21
293979--294031
6
9.2
6
73
22
51
50
3
0
45
1.19
293971--294029
10
5.9
10
72
21
52
52
3
1
42
1.28
294270--294312
19
2.3
19
80
8
52
67
0
9
23
1.19
297880--297926
17
2.8
17
76
0
58
42
0
4
53
1.20
297994--298027
15
2.3
15
90
10
52
47
23
11
17
1.81
298019--298065
24
2.0
24
83
8
60
51
31
8
8
1.63
300456--300504
6
8.2
6
86
6
64
51
2
0
46
1.12
300463--300504
17
2.4
17
92
4
66
52
2
0
45
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
300455--300539
18
4.6
18
76
16
77
52
5
0
41
1.25

Tables:   1   2

The End!