Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011244.1 Kokia drynarioides strain JFW-HI SEQ_126222, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  289877

Tables:   1   2   

This is table  2  of  2  ( 146 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
274799--274830
16
2.0
16
93
0
55
21
18
28
31
1.97
279072--279254
30
6.2
29
75
10
122
35
7
22
34
1.82
280983--281097
46
2.5
48
85
7
157
21
19
25
33
1.97
281085--281747
38
16.9
37
72
14
404
25
17
24
31
1.97
281085--281313
78
2.9
78
81
5
257
26
17
24
31
1.97
281112--281313
78
2.6
79
84
3
264
27
17
24
30
1.97
281086--281513
197
2.2
199
82
5
510
26
17
25
31
1.97
281322--281752
78
5.5
78
84
3
508
25
16
25
32
1.96
281049--281634
277
2.1
278
83
5
747
25
16
25
31
1.96
281952--282421
49
9.6
49
73
3
363
21
28
15
33
1.94
281934--282414
98
4.9
98
85
1
577
21
29
15
33
1.94
283370--283435
7
8.9
7
74
23
55
1
18
0
80
0.79
283372--283426
17
3.2
17
82
10
60
0
21
0
78
0.76
283371--283427
29
2.0
29
89
6
89
0
21
0
78
0.74
284301--284343
16
2.4
18
88
11
63
0
20
2
76
0.89
284297--284342
11
4.3
11
81
8
51
0
21
2
76
0.90
284267--284416
81
1.9
79
87
10
222
8
21
10
60
1.54
286645--286722
24
3.2
24
85
1
102
51
5
12
30
1.62
288874--288940
30
2.3
29
82
5
80
38
2
16
41
1.64
288890--288970
30
2.7
31
80
3
85
40
3
14
40
1.64
288924--289030
30
3.6
30
75
19
82
40
5
17
36
1.74
288955--289024
30
2.4
30
85
7
90
38
4
18
38
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
289467--289506
10
3.8
10
87
12
62
42
2
7
47
1.45
289466--289506
12
3.6
12
80
12
59
43
2
7
46
1.44
289467--289518
22
2.4
22
87
6
70
44
3
7
44
1.51
289830--289877
2
24.0
2
86
0
60
43
2
4
50
1.33

Tables:   1   2

The End!