Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011431.1 Kokia drynarioides strain JFW-HI SEQ_126415, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  176649

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7349--7375
2
13.5
2
100
0
54
48
0
0
51
1.00
10238--10270
5
6.6
5
100
0
66
39
21
0
39
1.53
20050--20097
23
2.1
24
88
7
73
31
18
8
41
1.80
22920--22960
18
2.2
19
86
4
57
29
17
19
34
1.94
26003--26041
6
6.5
6
87
0
51
46
0
30
23
1.53
29054--29098
23
2.0
22
82
4
54
37
8
0
53
1.32
42150--42193
2
22.0
2
95
0
79
0
2
50
47
1.13
43578--43612
2
17.5
2
100
0
70
51
0
0
48
1.00
44409--44471
26
2.3
28
79
15
69
36
3
0
60
1.13
55793--55853
30
2.0
32
87
6
90
39
1
1
57
1.18
57030--57060
16
1.9
16
93
0
53
38
22
0
38
1.54
63900--63928
8
3.6
8
100
0
58
89
0
10
0
0.48
66405--66439
13
2.8
13
91
4
54
68
0
5
25
1.11
95099--95141
20
2.2
20
82
0
50
41
4
0
53
1.21
113121--113146
4
6.5
4
100
0
52
0
23
0
76
0.78
135356--135453
23
4.2
22
75
12
79
11
25
22
40
1.87
135452--135506
23
2.4
23
87
0
83
12
21
18
47
1.82
137431--137533
23
4.4
23
96
1
179
12
17
26
43
1.84
142872--142936
28
2.3
28
78
7
69
41
7
3
47
1.48
143363--143394
13
2.6
12
90
9
55
34
18
6
40
1.76
146670--146704
7
5.0
7
100
0
70
0
14
0
85
0.59
147820--147918
37
2.6
38
75
3
92
31
26
19
23
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
147829--147918
38
2.4
37
77
3
90
30
27
18
23
1.98
148768--148802
14
2.5
14
85
0
52
62
2
0
34
1.10
152767--152844
37
2.1
37
97
2
149
19
17
17
44
1.87
154942--154969
2
14.0
2
100
0
56
50
0
0
50
1.00
155383--155415
17
1.9
17
93
0
57
60
0
0
39
0.97
155746--155782
6
6.2
6
100
0
74
16
0
67
16
1.23
169686--169827
58
2.4
59
80
6
173
41
16
15
26
1.88
174201--174226
2
13.0
2
100
0
52
50
50
0
0
1.00
174929--174983
24
2.3
24
87
0
74
27
14
9
49
1.73

Tables:   1

The End!