Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011440.1 Kokia drynarioides strain JFW-HI SEQ_126424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50823

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38--88
4
12.8
4
87
8
77
0
23
0
76
0.79
38--95
11
5.3
11
87
10
75
1
22
0
75
0.89
21957--21993
17
2.2
18
85
9
51
56
0
21
21
1.42
21944--21993
22
2.3
22
79
6
57
56
2
20
22
1.53
23488--23541
23
2.3
23
78
12
65
51
3
3
40
1.37
23498--23546
23
2.1
24
88
7
75
42
4
4
48
1.40
23565--23754
59
3.2
58
84
4
236
26
16
10
47
1.78
23893--24004
58
1.9
58
81
5
136
46
11
16
25
1.81
23955--24026
31
2.4
31
83
6
94
44
6
20
27
1.77
23900--24086
89
2.1
89
84
5
236
44
11
17
26
1.82
27398--27422
1
25.0
1
100
0
50
0
0
0
100
0.00
28311--28350
19
2.1
19
95
0
71
30
7
0
62
1.23
34190--34241
11
4.5
11
78
7
50
40
1
3
53
1.30
34156--34264
6
19.0
6
71
14
70
43
0
2
53
1.21
34184--34264
23
3.5
23
78
8
76
44
1
2
51
1.22
34201--34264
29
2.2
29
77
5
76
46
1
1
50
1.20
34156--34264
17
6.4
17
81
5
130
43
0
2
53
1.21
36037--36270
29
8.0
28
79
8
236
35
28
1
34
1.68
36049--36269
59
3.8
58
82
7
268
35
28
1
34
1.68
36320--36432
58
1.9
59
90
1
183
38
24
3
33
1.73
36341--36434
29
3.2
29
71
11
93
39
25
3
31
1.72
36308--36442
58
2.3
59
79
6
175
34
22
2
40
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47925--49464
205
7.5
205
83
3
1907
35
19
21
20
1.93
49364--49578
114
1.9
114
91
1
351
35
20
23
20
1.96
49172--49784
319
1.9
319
92
0
1019
37
20
21
20
1.95
49478--50822
205
6.6
205
88
1
1961
36
20
21
21
1.95
48959--49980
524
2.0
519
90
1
1625
36
20
22
20
1.95

Tables:   1

The End!