Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011447.1 Kokia drynarioides strain JFW-HI SEQ_126431, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  482958

Tables:   1   2   

This is table  2  of  2  ( 162 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
336958--337096
59
2.4
60
84
4
176
41
23
1
33
1.63
337073--337122
23
2.2
23
85
7
66
44
22
0
34
1.53
346601--346718
30
4.0
30
84
5
159
42
21
0
35
1.59
347272--347366
47
2.0
47
100
0
190
21
29
14
34
1.93
350304--350626
158
2.0
158
87
0
457
26
24
21
27
1.99
355624--355653
3
10.0
3
100
0
60
66
0
0
33
0.92
356686--356771
43
2.0
43
100
0
172
18
16
34
30
1.93
359023--359093
23
3.1
23
68
11
56
42
4
1
52
1.29
363066--363121
28
2.0
28
92
0
94
64
3
3
28
1.27
363070--363161
29
3.1
29
86
7
116
60
4
3
31
1.32
363159--363196
15
2.7
14
84
8
51
52
10
0
36
1.36
373953--373994
21
2.0
21
81
9
50
26
11
2
59
1.45
374102--374143
18
2.4
17
84
11
57
54
0
2
42
1.13
374805--374868
27
2.5
24
81
18
85
43
3
17
35
1.65
375418--375468
25
2.0
26
88
3
77
21
15
19
43
1.88
376083--376126
23
1.9
23
90
0
70
34
6
20
38
1.79
376828--376890
27
2.4
26
89
2
90
41
1
6
50
1.37
380574--380653
41
2.0
41
92
0
133
26
11
31
31
1.91
381648--381791
46
3.1
46
89
0
225
45
15
11
26
1.81
383998--384033
17
2.1
17
89
0
54
52
8
13
25
1.68
386263--386317
24
2.2
25
78
9
60
69
7
5
18
1.32
396898--396943
3
15.3
3
100
0
92
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
406539--406596
28
2.1
28
90
0
89
44
17
18
18
1.87
406793--407040
43
5.7
43
77
8
218
36
18
11
33
1.87
406788--407040
86
2.9
86
78
6
253
37
18
11
33
1.86
406806--407042
129
1.8
130
84
4
327
36
17
12
33
1.87
416500--416541
18
2.4
18
80
11
52
4
21
0
73
1.01
421582--421619
20
2.0
18
90
10
58
13
5
5
76
1.13
426036--426069
17
2.1
17
88
5
52
35
0
14
50
1.44
429057--429284
114
2.0
114
100
0
456
28
17
19
34
1.95
430776--430813
11
3.5
11
82
13
51
55
5
7
31
1.51
430892--431122
43
5.3
43
84
3
263
34
19
10
34
1.87
436948--437012
24
2.6
25
87
2
96
24
20
23
32
1.98
439448--439515
32
2.1
32
100
0
136
36
30
2
29
1.72
451825--451864
21
1.9
21
84
0
53
15
27
15
42
1.86
453249--453275
12
2.2
12
100
0
54
7
0
29
62
1.22
462761--462894
67
2.0
67
95
0
241
44
9
19
26
1.82
470252--470297
20
2.3
19
88
7
65
23
2
0
73
0.94
473025--473067
9
4.7
9
80
13
52
72
6
0
20
1.08
473024--473068
10
4.7
10
79
20
60
73
6
0
20
1.05
475036--475096
30
2.0
30
90
0
95
22
27
34
14
1.94
477319--477885
154
3.7
149
84
9
663
32
0
13
53
1.46

Tables:   1   2

The End!