Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011480.1 Kokia drynarioides strain JFW-HI SEQ_126464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  138786

Tables:   1   

This is table  1  of  1  ( 63 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4368--4427
17
3.5
17
70
20
52
18
40
3
38
1.67
5290--5322
12
2.8
12
86
13
50
30
6
6
57
1.47
7296--7388
43
2.1
44
82
2
107
20
13
30
35
1.92
12660--12707
24
2.0
24
100
0
96
41
16
20
20
1.90
14194--14225
9
3.7
9
91
8
57
46
0
0
53
1.00
18711--18778
31
2.1
33
84
10
88
47
13
4
35
1.63
20015--20118
51
2.1
49
92
3
172
48
0
0
50
1.07
20020--20082
22
3.0
21
80
17
76
50
0
0
49
1.00
20040--20111
29
2.4
30
88
4
110
51
0
0
48
1.00
20040--20118
20
4.0
20
73
21
67
49
1
0
49
1.09
20906--21064
79
2.0
79
97
0
300
21
22
10
45
1.82
24777--24823
16
2.9
16
81
15
60
61
0
0
38
0.96
25840--25919
20
4.2
20
73
13
62
32
0
2
65
1.06
25809--25905
47
2.1
46
84
9
126
35
0
3
61
1.11
27300--27336
4
9.5
4
94
5
67
51
0
0
48
1.00
34967--35341
30
12.6
30
72
10
234
37
22
2
37
1.69
34988--35283
59
5.0
59
78
8
244
37
21
2
38
1.67
41228--41321
49
1.9
49
95
0
170
25
21
23
29
1.99
43755--44286
49
10.9
50
72
10
242
34
15
30
19
1.93
44036--44314
49
5.7
48
72
10
172
32
16
31
19
1.94
44036--44295
99
2.6
98
79
6
274
32
16
31
19
1.94
46534--46689
30
5.2
30
79
6
165
38
18
5
37
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46534--46699
60
2.8
58
80
7
190
38
18
4
37
1.72
46534--46793
30
8.8
29
76
11
163
38
20
4
36
1.72
49274--49315
10
4.6
9
85
11
50
76
0
2
21
0.90
57156--57197
17
2.4
17
88
4
57
47
2
28
21
1.63
62234--62303
11
6.4
11
74
0
59
67
10
5
17
1.39
62275--62316
22
1.9
22
85
0
57
66
14
9
9
1.44
71205--71246
19
2.3
19
80
16
52
33
0
2
64
1.07
72134--72407
145
1.9
145
82
3
345
37
23
14
24
1.92
73466--73546
27
3.0
26
77
13
85
46
2
1
49
1.23
78389--78436
12
3.9
12
75
2
51
43
0
0
56
0.99
78948--78983
3
12.0
3
87
0
54
66
0
30
2
1.06
81344--81391
24
2.0
25
95
4
89
50
8
8
33
1.63
84088--84122
18
1.9
18
88
11
54
5
22
5
65
1.36
84784--84810
14
1.9
14
100
0
54
0
29
7
62
1.22
87441--87658
42
5.2
42
80
3
208
38
11
25
25
1.89
87556--87703
41
3.6
40
83
8
129
37
8
22
31
1.84
93546--93590
22
2.1
22
84
12
58
22
0
28
48
1.50
94038--94157
42
2.9
42
76
6
127
35
8
25
30
1.85
96887--96962
38
2.0
38
85
10
102
13
25
1
60
1.41
97629--97670
14
3.0
14
80
10
50
2
28
2
66
1.16
98868--98931
26
2.5
25
85
10
76
26
18
23
31
1.98
103513--103581
22
3.2
22
78
11
72
8
4
17
69
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
103513--103570
20
2.8
20
79
10
62
6
3
18
70
1.24
103578--103635
12
4.8
12
77
8
55
6
8
13
70
1.32
103551--103665
32
3.5
31
70
15
79
11
6
13
69
1.35
103534--103661
68
1.9
67
83
4
168
10
6
14
69
1.35
103566--103689
24
5.3
24
67
13
62
11
6
14
67
1.40
103584--103704
56
2.2
55
83
3
143
12
4
14
67
1.38
103584--103662
12
6.9
12
74
11
58
12
6
12
68
1.38
103653--103692
21
1.9
21
85
10
55
10
2
17
70
1.27
103821--103902
39
2.1
38
80
10
94
28
0
6
65
1.16
106096--106135
6
6.7
6
100
0
80
0
0
50
50
1.00
110794--110928
66
2.0
66
100
0
270
31
1
20
46
1.60
112109--112147
19
2.1
19
95
0
69
25
33
10
30
1.89
113279--113351
17
4.4
16
75
16
60
57
12
15
15
1.65
121542--121602
20
3.0
20
67
9
52
50
6
13
29
1.66
136471--136636
29
5.6
28
71
21
108
24
16
10
48
1.78
136471--136658
60
3.2
60
85
6
233
25
15
10
48
1.77
136862--136986
31
4.2
31
73
11
107
47
9
15
28
1.76
136807--136986
31
6.0
31
65
20
96
45
11
17
25
1.82
136807--136986
89
2.0
90
83
5
231
45
11
17
25
1.82

Tables:   1

The End!