Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011524.1 Kokia drynarioides strain JFW-HI SEQ_126510, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50941

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3103--3154
19
2.7
18
79
11
50
38
1
5
53
1.36
8067--8112
24
1.9
24
82
8
58
50
23
4
21
1.67
9605--9897
158
1.9
158
87
0
433
24
24
21
29
1.99
10958--11039
37
2.2
37
82
4
103
29
29
15
25
1.96
12162--12190
8
3.8
8
95
4
51
93
0
6
0
0.36
15298--15337
15
2.6
14
85
14
53
25
0
5
70
1.08
16880--16944
21
3.1
21
60
8
51
35
35
9
20
1.84
16872--16957
42
2.0
42
95
0
154
36
32
10
20
1.87
21561--21947
198
2.0
199
97
1
744
24
9
12
53
1.67
22083--22143
25
2.3
27
75
18
65
45
0
0
54
1.00
22014--22121
48
2.3
46
84
9
139
45
0
0
52
1.13
21957--22138
26
6.8
26
67
20
74
47
1
1
50
1.15
25576--25629
20
2.6
20
85
5
63
62
0
1
35
1.06
25758--25839
39
2.0
43
81
9
100
53
3
0
42
1.18
26105--26163
7
8.4
7
81
10
50
37
0
0
62
0.95
26105--26174
20
3.3
20
74
14
61
37
0
0
62
0.95
26803--26845
22
2.0
22
95
0
77
39
2
4
53
1.34
30535--30569
3
11.7
3
87
0
52
65
31
0
2
1.07
31794--31861
31
2.2
31
91
0
109
33
7
13
45
1.71
33551--33773
29
7.7
29
80
9
226
38
3
22
34
1.72
33576--33800
59
3.8
59
81
10
239
38
3
23
34
1.72
33576--33773
88
2.3
88
84
7
269
39
3
22
34
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33544--33797
29
8.8
27
77
14
165
37
3
23
35
1.74
33775--33820
20
2.2
21
81
14
60
32
4
21
41
1.73
35000--35045
3
15.0
3
95
4
83
34
0
0
65
0.93
35002--35047
22
2.1
22
100
0
92
36
0
0
63
0.95
35008--35071
22
3.0
21
83
4
74
37
4
1
56
1.30
35662--35745
6
14.7
6
76
9
86
57
0
2
40
1.12
35662--35753
23
4.0
22
77
8
85
57
0
2
40
1.11
35655--35753
17
5.8
17
83
5
128
56
0
3
40
1.15
36129--36588
209
2.2
210
83
2
568
22
22
19
36
1.95
36535--36624
37
2.4
37
90
0
144
27
21
18
32
1.97
36315--36825
246
2.1
240
84
4
634
23
23
18
35
1.96
50105--50534
59
7.3
59
83
2
508
32
3
29
34
1.75
50110--50534
176
2.4
174
83
3
521
32
3
29
35
1.74
50140--50534
29
13.5
29
72
12
261
32
3
29
35
1.73

Tables:   1

The End!