Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011647.1 Kokia drynarioides strain JFW-HI SEQ_126639, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  417821

Tables:   1   2   

This is table  2  of  2  ( 157 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
284413--284451
11
3.4
12
86
10
55
5
0
15
79
0.90
290333--290357
13
1.9
13
100
0
50
60
0
0
40
0.97
294724--294772
21
2.2
23
85
7
66
42
4
2
51
1.32
298158--298199
21
2.0
21
100
0
84
19
19
4
57
1.58
307945--308009
19
3.4
18
73
12
58
41
1
6
50
1.36
307936--308004
20
3.5
20
75
18
63
44
1
7
46
1.40
312756--312798
23
2.0
23
90
9
72
53
16
9
20
1.70
314747--314789
19
2.3
18
84
7
59
74
2
0
23
0.93
318195--318282
40
2.2
40
87
0
122
37
11
13
37
1.81
318310--318361
9
5.8
9
86
0
50
46
23
5
25
1.74
318311--318361
18
2.8
18
84
0
66
45
23
5
25
1.75
325408--325462
22
2.5
22
87
0
74
20
7
9
63
1.47
325422--325454
14
2.3
15
89
5
50
18
9
12
60
1.57
325559--325588
15
2.0
15
93
0
51
43
0
0
56
0.99
332167--332203
17
2.1
18
85
14
51
67
10
8
13
1.41
347666--347733
35
1.9
35
85
5
93
33
11
1
52
1.47
348923--348967
24
1.9
24
82
13
58
53
4
17
24
1.62
356444--356482
16
2.4
17
86
4
53
48
5
35
10
1.59
359477--359537
28
2.1
27
80
16
70
11
19
0
68
1.19
361222--361271
23
2.2
23
85
7
66
24
0
24
52
1.48
364037--364162
43
3.0
42
83
3
128
26
26
11
35
1.91
364068--364162
43
2.2
43
90
3
147
27
25
13
33
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
368179--368237
16
3.5
16
73
13
55
67
3
3
25
1.21
384100--384125
10
2.6
10
100
0
52
0
34
19
46
1.50
385124--385161
19
2.0
20
89
5
60
42
2
5
50
1.39
385533--385613
19
4.1
18
81
13
72
53
4
0
41
1.22
385608--385633
8
3.2
8
100
0
52
69
0
0
30
0.89
385533--385678
16
8.1
17
68
14
71
56
4
0
39
1.19
388097--388139
17
2.5
17
76
0
50
18
18
27
34
1.95
388408--388466
24
2.5
24
86
5
75
49
10
15
25
1.76
389998--390023
2
13.0
2
100
0
52
50
0
0
50
1.00
398842--398900
24
2.5
24
86
5
75
49
10
15
25
1.76
399865--399901
17
2.2
17
95
0
65
21
13
29
35
1.92
400207--400254
24
2.0
24
87
0
69
45
12
16
25
1.82
404100--404369
75
3.5
75
82
3
290
47
9
10
32
1.71
411219--411509
51
5.6
51
86
2
368
31
14
23
30
1.94
413958--413987
11
2.7
11
94
0
51
56
0
0
43
0.99

Tables:   1   2

The End!