Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011729.1 Kokia drynarioides strain JFW-HI SEQ_126723, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80066

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26--64
4
9.8
4
83
10
53
0
23
0
76
0.78
24--68
21
2.2
20
84
7
65
0
26
0
73
0.84
636--684
16
3.0
16
76
5
53
53
0
6
40
1.26
11449--11483
18
1.9
18
88
0
52
48
20
5
25
1.71
16354--16388
17
2.0
18
88
5
54
14
14
8
62
1.53
17475--17528
21
2.6
22
82
8
69
35
1
0
62
1.06
17477--17528
24
2.2
23
86
3
68
36
1
0
61
1.07
29237--29285
24
2.0
24
84
0
62
30
26
16
26
1.97
31719--31772
27
2.0
28
96
3
101
53
0
0
46
1.00
32568--32658
18
5.3
18
69
18
68
42
0
34
23
1.54
32560--32659
34
2.9
35
87
1
148
44
0
34
22
1.53
33105--33145
21
1.9
21
85
5
55
51
12
17
19
1.76
35657--35737
26
3.2
26
77
3
85
28
1
6
64
1.25
35685--35719
18
1.9
18
88
0
52
17
2
8
71
1.23
37300--37372
24
3.1
23
82
5
85
27
10
9
52
1.68
58921--58955
18
1.9
18
88
11
54
34
0
0
65
0.93
58932--58984
25
2.1
26
82
10
65
45
0
0
54
0.99
59921--59971
19
2.7
19
78
9
59
45
0
0
54
0.99
60678--60707
15
1.9
16
93
6
53
53
3
0
43
1.17
63644--63671
12
2.3
12
100
0
56
25
0
39
35
1.56
64290--64635
123
2.8
122
84
9
443
42
7
10
40
1.66
67145--67182
3
12.7
3
100
0
76
68
0
31
0
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73084--73112
3
9.7
3
100
0
58
34
34
0
31
1.58
76709--76780
31
2.3
32
83
7
94
18
11
20
50
1.77
78692--78787
35
2.8
34
84
10
124
39
0
4
56
1.19
78707--78785
6
13.5
6
76
10
74
39
0
3
56
1.17
78692--78793
17
5.9
17
82
6
125
41
0
3
54
1.19
79459--79484
3
8.7
3
100
0
52
65
0
0
34
0.93

Tables:   1

The End!