Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011836.1 Kokia drynarioides strain JFW-HI SEQ_126832, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  501934

Tables:   1   2   

This is table  2  of  2  ( 142 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
411208--411245
16
2.4
16
82
8
51
44
5
2
47
1.39
411985--412021
16
2.3
16
86
13
58
56
2
0
40
1.13
415902--415927
2
13.0
2
100
0
52
50
0
0
50
1.00
430294--430341
19
2.4
20
83
13
55
14
14
10
60
1.59
435250--435285
3
12.0
3
100
0
72
66
0
0
33
0.92
442223--442258
3
12.0
3
100
0
72
66
0
0
33
0.92
449260--449286
14
1.9
14
100
0
54
25
7
14
51
1.68
449344--449416
31
2.4
31
84
6
87
20
10
20
47
1.80
461640--461689
20
2.5
20
87
3
66
22
20
34
24
1.97
470207--470256
25
2.0
25
100
0
100
48
8
20
24
1.76
479080--479208
64
2.0
65
98
1
251
37
12
22
27
1.90
481694--481993
147
2.0
149
91
3
487
44
13
17
24
1.84
485174--485251
28
2.7
28
84
4
102
51
1
0
47
1.09
489213--489248
10
3.7
10
88
7
56
72
0
8
19
1.10
497448--497490
16
2.8
14
83
16
50
20
0
4
74
1.00
497448--497509
5
11.4
5
77
19
54
19
1
6
72
1.15
499221--499273
21
2.5
21
93
0
88
37
3
41
16
1.67
499573--499636
15
4.0
15
79
15
74
31
0
28
40
1.57
501030--501104
24
3.1
24
86
3
98
28
21
22
28
1.99
501219--501273
23
2.5
23
88
11
80
9
20
27
43
1.81
501219--501286
23
3.0
23
81
12
79
10
17
26
45
1.80
501870--501920
20
2.5
21
81
15
54
47
0
11
41
1.40

Tables:   1   2

The End!