Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01011945.1 Kokia drynarioides strain JFW-HI SEQ_126943, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  301141

Tables:   1   2   

This is table  2  of  2  ( 153 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
259462--259553
6
15.8
6
68
10
57
52
4
0
43
1.21
259462--259568
17
6.2
17
79
3
115
51
5
0
42
1.25
260632--260712
25
3.3
24
75
10
65
66
4
12
16
1.40
261833--261949
60
2.0
59
91
1
189
24
10
12
52
1.71
262753--262791
19
2.1
19
90
0
60
20
38
17
23
1.93
263607--263835
80
2.8
80
81
1
260
31
28
17
22
1.96
265437--265707
30
9.0
30
78
7
167
36
22
2
39
1.67
265470--265707
30
7.9
30
77
3
174
36
22
1
39
1.64
265709--265844
29
4.6
29
73
6
112
36
24
2
37
1.68
265573--265842
135
2.0
136
79
6
298
37
23
2
37
1.67
274216--274551
49
6.8
48
71
6
170
35
15
30
18
1.93
274138--274705
99
5.8
100
73
10
366
35
16
29
18
1.93
274234--274732
50
10.1
50
71
8
220
35
16
29
18
1.92
274208--274475
98
2.7
99
76
4
272
35
16
29
18
1.93
274461--274648
100
1.9
100
83
4
245
36
17
28
18
1.93
275391--275438
16
2.9
16
84
3
60
43
6
4
45
1.48
275944--276002
26
2.5
23
86
10
75
28
3
6
61
1.38
276959--277323
30
12.3
30
77
7
311
37
24
1
36
1.63
276937--277323
59
6.6
58
79
6
300
37
24
1
36
1.63
279859--279888
14
2.1
14
93
0
51
70
3
6
20
1.25
285180--285263
17
4.9
17
75
10
82
39
2
5
52
1.39
285172--285263
34
2.7
34
82
1
112
39
2
5
53
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
285172--285276
34
3.1
33
76
6
102
42
1
4
50
1.34
287018--287074
29
1.9
30
89
3
89
38
22
0
38
1.55
287018--287096
30
2.7
30
82
2
88
36
22
0
40
1.55
287085--287233
29
5.1
29
81
5
165
35
24
4
34
1.77
287085--287233
59
2.5
58
86
4
192
35
24
4
34
1.77
287399--287440
14
2.9
15
82
10
61
19
7
4
69
1.31
292889--293044
50
3.1
51
75
10
140
34
15
12
37
1.85
297301--297360
16
3.8
15
78
10
66
33
3
0
63
1.11
298799--298830
15
2.1
15
100
0
64
21
18
12
46
1.82
299469--299540
21
3.4
21
92
3
117
22
19
11
47
1.80
300124--300182
15
4.0
15
80
4
66
25
18
25
30
1.98

Tables:   1   2

The End!