Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012003.1 Kokia drynarioides strain JFW-HI SEQ_127001, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  291786

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
254130--254250
34
3.4
34
77
10
127
42
0
9
48
1.35
254090--254170
26
3.3
26
70
19
84
40
0
8
50
1.33
254160--254188
4
7.5
4
92
7
51
48
0
0
51
1.00
254205--254317
26
4.6
26
73
12
103
42
0
7
49
1.32
254234--254273
20
2.0
21
95
5
73
52
0
2
45
1.14
254130--254322
34
5.4
35
71
10
115
43
0
8
48
1.33
256391--256691
41
7.3
41
80
5
295
22
26
18
31
1.97
256352--256691
82
4.1
84
79
7
358
22
27
18
31
1.97
258850--259177
41
8.4
41
80
9
337
17
28
20
33
1.95
259014--259149
70
1.9
70
85
2
184
16
25
22
36
1.94
266501--266640
71
2.0
71
92
0
235
33
9
4
52
1.53
266849--266873
2
12.5
2
100
0
50
48
0
0
52
1.00
277960--278047
40
2.2
40
84
9
119
35
0
6
57
1.25
287197--287244
22
2.2
22
92
0
78
25
22
33
18
1.97
287494--287536
22
1.9
23
86
13
63
30
0
0
69
0.88
289025--289088
4
15.8
4
78
15
69
70
0
29
0
0.88
289434--289476
21
2.1
21
86
4
61
25
2
13
58
1.48
289954--290003
16
3.2
16
71
21
52
60
6
0
34
1.21

Tables:   1   2

The End!