genome.fa.s12075.2.7.7.80.10.50.1000.1.html

Tandem Repeats Finder Program written by:

Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012075.1 Kokia drynarioides strain JFW-HI SEQ_127073, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29862

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment

Table Explanation

Indices	Period Size	Copy Number	Consensus Size	Percent Matches	Percent Indels	Score	A	C	G	T	Entropy (0-2)
206--16809	424	39.1	421	76	9	11905	28	18	14	39	1.89
206--16023	216	74.4	210	74	10	9669	28	18	14	39	1.89
5786--7308	215	7.0	215	78	9	1474	27	18	14	39	1.89
6212--7087	459	1.9	462	84	4	1169	28	17	14	39	1.89
15837--16198	186	1.9	191	82	7	461	28	17	14	39	1.89
16031--16819	215	3.7	217	83	9	914	26	17	14	41	1.88
17800--17862	32	2.0	32	84	6	83	39	15	11	33	1.83
17897--18005	39	2.8	38	88	2	164	50	15	5	28	1.66
18369--20030	421	3.9	418	82	6	1948	28	17	14	40	1.89
18367--19984	216	7.6	215	80	7	1715	28	17	14	39	1.89
18367--19984	637	2.5	632	82	6	1927	28	17	14	39	1.89
24959--25907	214	4.5	214	79	7	1020	27	18	14	39	1.90
25903--29693	215	17.9	217	80	6	3851	28	17	14	39	1.89
24959--29846	421	11.6	419	80	7	4192	28	17	14	39	1.89

Tables:   1

The End!