Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01012092.1 Kokia drynarioides strain JFW-HI SEQ_127091, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  300402

Tables:   1   2   

This is table  2  of  2  ( 147 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
262444--262525
28
2.9
27
74
16
85
36
1
29
32
1.65
262326--262577
116
2.2
117
82
7
291
38
3
25
32
1.73
262326--262581
59
4.4
58
76
11
211
38
3
25
32
1.73
263681--263740
16
3.9
16
82
8
63
31
1
1
65
1.13
263681--263741
3
20.0
3
78
9
61
31
1
1
65
1.12
264451--264497
17
2.8
17
86
0
67
46
8
2
42
1.46
264484--264547
25
2.6
25
97
0
119
53
7
6
32
1.55
265270--265547
50
5.6
50
73
12
196
15
23
19
41
1.89
265432--265742
99
3.1
98
79
9
315
17
26
18
38
1.92
277311--277613
58
5.2
58
78
10
289
39
4
25
30
1.76
277306--277613
29
10.7
29
70
17
160
38
4
26
30
1.77
277311--277604
115
2.5
115
81
7
328
39
4
25
29
1.76
277394--277593
57
3.5
57
85
6
253
37
5
28
29
1.78
278722--278770
19
2.6
19
90
0
71
36
2
0
61
1.08
278720--278781
22
2.8
22
82
0
79
35
6
0
58
1.24
278728--278770
13
3.4
13
87
12
63
37
0
0
62
0.95
278737--278780
19
2.3
19
84
0
52
36
6
0
56
1.26
278720--278770
3
16.3
3
84
8
66
35
1
0
62
1.06
279465--279512
6
8.3
6
81
9
64
52
4
0
43
1.20
279465--279512
11
4.2
12
81
10
64
52
4
0
43
1.20
279463--279549
17
5.0
17
78
9
86
51
8
2
37
1.44
281230--281257
13
2.2
13
100
0
56
53
7
7
32
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
294529--294601
31
2.3
31
85
2
92
20
19
41
19
1.91
296093--296201
56
1.9
59
83
5
143
42
2
4
50
1.37
297258--297296
15
2.7
15
84
4
53
61
2
28
7
1.37
297423--297462
11
3.8
11
83
9
57
55
0
0
45
0.99
297448--297476
15
1.9
15
100
0
58
55
0
0
44
0.99

Tables:   1   2

The End!